Bioconductor DNA Methylation

Showing : DNA Methylation • reset

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1.4k

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minfi cell proportion estimateCellCounts DNA Methylation

5.7 years ago grayapply2009 • 0

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3.0k

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normalization DNA methylation WGCNA

updated 6.4 years ago by Peter Langfelder ★ 3.0k • written 6.4 years ago by enora.fremy • 0

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1.4k

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medips medip-seq dna methylation dmr analysis

updated 7.0 years ago by Lukas Chavez ▴ 570 • written 7.0 years ago by mtefit • 0

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2.2k

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R gdc rna-seq dna methylation

updated 7.1 years ago by Sean Davis 21k • written 7.1 years ago by RichardJActon ▴ 50

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2.0k

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minfi normalization outliers dna methylation densityplot

7.3 years ago peter.fransquet • 0

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1.0k

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differential variability dna methylation iEVORA DVP

7.6 years ago poojitha.stemcell ▴ 10

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1.4k

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rnbeads methylation methylationepic dna methylation

7.8 years ago gabrielrfries • 0

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1.5k

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dna methylation biseq

updated 7.9 years ago by Gordon Smyth 53k • written 7.9 years ago by ahmad.moousavi • 0

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2.5k

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tcgabiolinks dna methylation

updated 8.0 years ago by Marcel Ramos 700 • written 8.0 years ago by michaelwxf2012 • 0

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2.5k

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dna methylation illimina 450k methylation beta M significance

updated 8.2 years ago by James W. MacDonald 68k • written 8.2 years ago by skids121 • 0

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1.6k

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CNV minfi preprocessing dna methylation

8.7 years ago Thomas • 0

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1.4k

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microarray HM450 dna methylation cohcap

updated 8.8 years ago by James W. MacDonald 68k • written 8.9 years ago by poojitha.stemcell ▴ 10

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1.5k

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minfi bumphunter DNA methylation illumina450k

updated 9.4 years ago by James W. MacDonald 68k • written 9.4 years ago by fleur_p90 • 0

13 results • Page 1 of 1

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Comment: Senior Teaching Fellow (MSc Computational Biomedicine) by eja.ger.m • 0

Opportunities like this remind me how digital learning is evolving, much like modern mobile games. With programmes becoming fully online an…

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by ATpoint ★ 5.0k

Since the donor effect is so clear I assume that a paired analysis within donor is strictly necessary to get DEGs, and therefore one would …

Comment: Large logFC but somewhat high FDR by JKim • 0

forgot to attach some other plots, which may be informative... RLE plot ![enter image description here][1] pvalue distribution ![enter …

Comment: upstream git branches of bioc-release by andres.wokaty ▴ 70

Yes, all packages in https://bioconductor.org/packages/json/3.22bioc/packages.json have a `RELEASE_3_22` branch.

Comment: upstream git branches of bioc-release by Jeroen ▴ 10

Can we assume that each package git repo will have a `RELEASE_3_22` branch, even when they had "a build error in release"?

Votes

Comment: upstream git branches of bioc-release

A: p.adjust BH generates duplicate values

Answer: gene Set with high AUC score but no cells assigned to cell type

Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

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Popular Question to story.benjamin ▴ 20